{
  "_id": "6a104680acfb0bcc41c9eb11",
  "Package": "learnPopGen",
  "Version": "1.0.6",
  "Date": "2022-12-29",
  "Title": "Population Genetic Simulations & Numerical Analysis",
  "Author": "Liam J. Revell",
  "Maintainer": "Liam J. Revell <liam.revell@umb.edu>",
  "ZipData": "no",
  "Description": "Conducts various numerical analyses and simulations in\npopulation genetics and evolutionary theory, primarily for the\npurpose of teaching (and learning about) key concepts in\npopulation & quantitative genetics, and evolutionary theory.",
  "License": "GPL (>= 2)",
  "URL": "http://github.com/liamrevell/learnPopGen",
  "Packaged": {
    "Date": "2026-05-10 18:09:41 UTC",
    "User": "root"
  },
  "Config/pak/sysreqs": "libglpk-dev libxml2-dev",
  "Repository": "https://liamrevell.r-universe.dev",
  "Date/Publication": "2022-12-29 18:51:54 UTC",
  "RemoteUrl": "https://github.com/liamrevell/learnpopgen",
  "RemoteRef": "HEAD",
  "RemoteSha": "de077491702aaaa07eaedb72a6e0eb248f054219",
  "NeedsCompilation": "no",
  "MD5sum": "72ff3bb52a7ff5a49ffe290d79692831",
  "_user": "liamrevell",
  "_type": "src",
  "_file": "learnPopGen_1.0.6.tar.gz",
  "_fileid": "13f5faf72ad3e3f82fb0c22e600b1489504bdcc0dd61f1d0e0c7670b75dcf745",
  "_filesize": 164186,
  "_sha256": "13f5faf72ad3e3f82fb0c22e600b1489504bdcc0dd61f1d0e0c7670b75dcf745",
  "_created": "2026-05-10T18:09:41.000Z",
  "_published": "2026-05-22T12:05:20.179Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77375818831,
      "time": 131,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "6905843894"
    },
    {
      "job": 77375818989,
      "time": 134,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6905844117"
    },
    {
      "job": 77375818819,
      "time": 93,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "6905839743"
    },
    {
      "job": 77375818581,
      "time": 124,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6905843146"
    },
    {
      "job": 77375818131,
      "time": 169,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6905829887"
    },
    {
      "job": 77375818105,
      "time": 126,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7160043184"
    },
    {
      "job": 77375818524,
      "time": 139,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "6905844633"
    },
    {
      "job": 77375818777,
      "time": 98,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "6905840168"
    },
    {
      "job": 77375819077,
      "time": 117,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6905842657"
    }
  ],
  "_buildurl": "https://github.com/r-universe/liamrevell/actions/runs/25635944353",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/liamrevell/learnpopgen",
  "_commit": {
    "id": "de077491702aaaa07eaedb72a6e0eb248f054219",
    "author": "Liam J. Revell <liam.revell@umb.edu>",
    "committer": "Liam J. Revell <liam.revell@umb.edu>",
    "message": "add some as.data.frame methods\n",
    "time": 1672339914
  },
  "_maintainer": {
    "name": "Liam J. Revell",
    "email": "liam.revell@umb.edu",
    "login": "liamrevell",
    "uuid": 6076607
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.6",
      "role": "Depends"
    },
    {
      "package": "grDevices",
      "role": "Imports"
    },
    {
      "package": "graphics",
      "role": "Imports"
    },
    {
      "package": "gtools",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "phytools",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    }
  ],
  "_owner": "liamrevell",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 26,
  "_contributors": [
    {
      "user": "liamrevell",
      "count": 80,
      "uuid": 6076607
    }
  ],
  "_userbio": {
    "uuid": 6076607,
    "type": "user",
    "name": "Liam J. Revell"
  },
  "_downloads": {
    "count": 391,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/learnPopGen"
  },
  "_mentions": 1,
  "_devurl": "https://github.com/liamrevell/learnpopgen",
  "_searchresults": 54,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/learnPopGen.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/liamrevell/learnpopgen",
  "_realowner": "liamrevell",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.9.8",
      "date": "2018-10-12"
    },
    {
      "version": "1.0.4",
      "date": "2019-05-20"
    }
  ],
  "_exports": [
    "clt",
    "coalescent.plot",
    "drift.selection",
    "founder.event",
    "freqdep",
    "genetic.drift",
    "hardy.weinberg",
    "hawk.dove",
    "msd",
    "multilocus.hw",
    "mutation.selection",
    "phenotype.freq",
    "phenotype.selection",
    "rcd",
    "selection",
    "sexratio"
  ],
  "_help": [
    {
      "page": "clt",
      "title": "Illustrates the concept of the Central Limit Theorem",
      "topics": [
        "clt",
        "plot.clt",
        "print.clt"
      ]
    },
    {
      "page": "coalescent.plot",
      "title": "Creates a (usually animated) simulation of gene coalescence within a population",
      "topics": [
        "coalescent.plot",
        "plot.coalescent.plot",
        "print.coalescent.plot"
      ]
    },
    {
      "page": "drift.selection",
      "title": "Simulation of genetic drift & natural selection at a biallelic locus",
      "topics": [
        "drift.selection"
      ]
    },
    {
      "page": "founder.event",
      "title": "Simulation of a founder event or population bottleneck",
      "topics": [
        "founder.event"
      ]
    },
    {
      "page": "freqdep",
      "title": "Numerical analysis of a frequency dependent seletion model",
      "topics": [
        "freqdep"
      ]
    },
    {
      "page": "genetic.drift",
      "title": "Genetic drift simulation",
      "topics": [
        "genetic.drift"
      ]
    },
    {
      "page": "hardy.weinberg",
      "title": "Computes Hardy-Weinberg frequencies for a multiallelic locus or across multiple loci",
      "topics": [
        "hardy.weinberg",
        "multilocus.hw"
      ]
    },
    {
      "page": "hawk.dove",
      "title": "Analysis of hawk-dove game theoretic model",
      "topics": [
        "hawk.dove"
      ]
    },
    {
      "page": "msd",
      "title": "Migration, drift, and selection",
      "topics": [
        "msd"
      ]
    },
    {
      "page": "mutation.selection",
      "title": "Gene frequencies over time under mutation-selection balance",
      "topics": [
        "mutation.selection"
      ]
    },
    {
      "page": "phenotype.freq",
      "title": "Computes phenotypic distribution and its change through time due to natural selection on a polygenic trait",
      "topics": [
        "phenotype.freq",
        "phenotype.selection"
      ]
    },
    {
      "page": "rcd",
      "title": "Simulation of reproductive character displacement in an ecological community",
      "topics": [
        "rcd"
      ]
    },
    {
      "page": "selection",
      "title": "Numerical analysis of biallelic locus frequency independent selection",
      "topics": [
        "selection"
      ]
    },
    {
      "page": "sexratio",
      "title": "Hypothetical analysis of frequency dependent selection on a sex determining genetic locus",
      "topics": [
        "sexratio"
      ]
    }
  ],
  "_readme": "https://github.com/liamrevell/learnpopgen/raw/HEAD/README.md",
  "_rundeps": [
    "ape",
    "cli",
    "clusterGeneration",
    "coda",
    "codetools",
    "combinat",
    "cpp11",
    "DEoptim",
    "digest",
    "doParallel",
    "expm",
    "fastmatch",
    "foreach",
    "generics",
    "glue",
    "gtools",
    "igraph",
    "iterators",
    "lattice",
    "lifecycle",
    "magrittr",
    "maps",
    "MASS",
    "Matrix",
    "mnormt",
    "nlme",
    "numDeriv",
    "optimParallel",
    "phangorn",
    "phytools",
    "pkgconfig",
    "quadprog",
    "Rcpp",
    "rlang",
    "scatterplot3d",
    "vctrs"
  ],
  "_score": 4.846337112129806,
  "_indexed": true,
  "_nocasepkg": "learnpopgen",
  "_universes": [
    "liamrevell"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.6",
      "date": "2026-05-10T18:11:33.000Z",
      "distro": "noble",
      "commit": "de077491702aaaa07eaedb72a6e0eb248f054219",
      "fileid": "b275c48c72efb95e33b1df7cdf79991c0cb0e931635f6fc8ae91f93b24c521ae",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/liamrevell/actions/runs/25635944353"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.6",
      "date": "2026-05-10T18:11:35.000Z",
      "distro": "noble",
      "commit": "de077491702aaaa07eaedb72a6e0eb248f054219",
      "fileid": "ed4c78970ebc255685d5469ed3f22a54a9d53a8699a816cb8b8329ef9c3b3267",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/liamrevell/actions/runs/25635944353"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.6",
      "date": "2026-05-10T18:11:07.000Z",
      "commit": "de077491702aaaa07eaedb72a6e0eb248f054219",
      "fileid": "c91f3150b33bbc39a60640d61011ad2b01f6126517fa3826dd52d7469e7b0eb3",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/liamrevell/actions/runs/25635944353"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.6",
      "date": "2026-05-10T18:11:29.000Z",
      "commit": "de077491702aaaa07eaedb72a6e0eb248f054219",
      "fileid": "1162e3d45ff7d936970e310da2aad5794a9f0575e3aa80aeed5914b798a42677",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/liamrevell/actions/runs/25635944353"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.6",
      "date": "2026-05-10T18:11:26.000Z",
      "commit": "de077491702aaaa07eaedb72a6e0eb248f054219",
      "fileid": "ffd6020d440de767e4b340d886eefdcb4eecf188a9c4f59cbab3894d94cb2519",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/liamrevell/actions/runs/25635944353"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.6",
      "date": "2026-05-10T18:10:50.000Z",
      "commit": "de077491702aaaa07eaedb72a6e0eb248f054219",
      "fileid": "f15fb9aa77b1d748168573804db80b56cc782fefd91dd94a5d3fd64ef21d73cf",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/liamrevell/actions/runs/25635944353"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0.6",
      "date": "2026-05-10T18:11:13.000Z",
      "commit": "de077491702aaaa07eaedb72a6e0eb248f054219",
      "fileid": "1ed1f0d0546d42e24c49c20699d8a1fd164fb87ec9a86b3bc1c53abdb9352982",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/liamrevell/actions/runs/25635944353"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.6",
      "date": "2026-05-22T12:04:58.000Z",
      "commit": "de077491702aaaa07eaedb72a6e0eb248f054219",
      "fileid": "fc4ce33e74db2a2a06678ee83050c301fb14af70b9990add879a9e336ce2b9bf",
      "status": "success",
      "buildurl": "https://github.com/r-universe/liamrevell/actions/runs/25635944353"
    }
  ]
}